BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009C04LP1|AL426000
(855 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig978 1655 0.0
>3x_Contig978
Length = 3477
Score = 1655 bits (834), Expect = 0.0
Identities = 845/848 (99%), Gaps = 1/848 (0%)
Strand = Plus / Minus
Query: 9 tcaattcatcacaaacactgaggttggtaaagatatctccgttgaggaattgaaatctaa 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2972 tcaattcatcacaaacactgaggttggtaaagatatctccgttgaggaattgaaatctaa 2913
Query: 69 gttcgatgctattgtttacaccgttggctcgaccattcctagagacttgagaattcctgg 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2912 gttcgatgctattgtttacaccgttggctcgaccattcctagagacttgagaattcctgg 2853
Query: 129 tcgtgaattgaaaaacatcgactttgcaatgactttgctaaagagcaacacgcaagcttt 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2852 tcgtgaattgaaaaacatcgactttgcaatgactttgctaaagagcaacacgcaagcttt 2793
Query: 189 attagacagagacttagaaacaattaagaaacaaatcaaggggaagaaagttattgttat 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2792 attagacagagacttagaaacaattaagaaacaaatcaaggggaagaaagttattgttat 2733
Query: 249 tggtggtggtgataccggtaatgattgtttaggtacttctgtcagacatgg-cgctgcgt 307
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2732 tggtggtggtgataccggtaatgattgtttaggtacttctgtcagacatgggcgctgcgt 2673
Query: 308 cagttctaaactttgagttgttaccacaaccacctaacgaacgttctaaggacaatcctt 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2672 cagttctaaactttgagttgttaccacaaccacctaacgaacgttctaaggacaatcctt 2613
Query: 368 ggcctcaatggccacgtatcatgagaattgattacgggcatgcggaagtgaaagaacatt 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2612 ggcctcaatggccacgtatcatgagaattgattacgggcatgcggaagtgaaagaacatt 2553
Query: 428 acggaagagatcctcgtgagttctgcatcttatccaaggagtttattggaaatgaaaatg 487
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2552 acggaagagatcctcgtgagtactgcatcttatccaaggagtttattggaaatgaaaatg 2493
Query: 488 gtgaagtgaaagccattaaaaccgttcgtgtcgaatggaagaaatctcaatctggtgttt 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2492 gtgaagtgaaagccattaaaaccgttcgtgtcgaatggaagaaatctcaatctggtgttt 2433
Query: 548 ggcaaatggtagatgtaccaggttctgaacaaatatttgaagctgacatcgttctattat 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2432 ggcaaatggtagatgtaccaggttctgaacaaatatttgaagctgacatcgttctattat 2373
Query: 608 ccatgggtttcgtcggccctgaagtaatcgaagaccctacctttgtcaaatccaaaagag 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2372 ccatgggtttcgtcggccctgaagtaatcgaagaccctacctttgtcaaatccaaaagag 2313
Query: 668 gtaccatcactacgttgtcagattcctcgtactctgttgacggagacaaggtatttgcag 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2312 gtaccatcactacgttgtcagattcctcgtactctgttgacggagacaaggtatttgcag 2253
Query: 728 caggtgactgtwggagaggtcaatctctaatcgtgtgggctatccaagagggaagaaagt 787
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2252 caggtgactgtaggagaggtcaatctctaatcgtgtgggctatccaagagggaagaaagt 2193
Query: 788 gtgctacagccattgacacattcttgatggggtccacaaacttacctggaaatggtggta 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2192 gtgctacagccattgacacattcttgatggggtccacaaacttacctggaaatggtggta 2133
Query: 848 ttgtcaaa 855
||||||||
Sbjct: 2132 ttgtcaaa 2125
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6194
Number of Sequences: 1807
Number of extensions: 6194
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 855
length of database: 10,358,551
effective HSP length: 16
effective length of query: 839
effective length of database: 10,329,639
effective search space: 8666567121
effective search space used: 8666567121
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)